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Analysis of multidrug-resistant determinants of clinically isolated Acinetobacter baumannii CYZ via whole genome sequencing

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机构: [1]Hebei Med Univ, Dept Pathogen Biol, Shijiazhuang, Peoples R China [2]Hebei Med Univ, Sch Basic Med Sci, Shijiazhuang, Peoples R China [3]Hebei Med Univ, Hosp 4, Clin Lab, Shijiazhuang, Peoples R China [4]Hebei Med Univ, Dept Expt Ctr Teaching, Shijiazhuang, Peoples R China [5]Department of Parasitology, School of Basic Medical Sciences, Central South University, Hunan, PR Chinap
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关键词: Acinetobacter baumannii antimicrobial susceptibility test bioinformatics analysis complete genome sequence multidrug resistance mechanisms

摘要:
Acinetobacter baumannii is a multidrug-resistant coccobacillus responsible for severe nosocomial infectious diseases. This study mainly focuses on investigating the antimicrobial resistance features of a clinically isolated strain (A. baumannii CYZ) using the PacBio Sequel II sequencing platform. The chromosomal size of A. baumannii CYZ is 3,960,760 bp, which contains a total of 3803 genes with a G + C content of 39.06%. Functional analysis performed using the Clusters of Orthologous Groups of Proteins (COGs), Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, as well as the Comprehensive Antibiotic Resistance Database (CARD) revealed a complicated set of antimicrobial resistance determinants in the genome of A. baumannii CYZ, which were mainly classified into multidrug efflux pumps and transport systems, & beta;-lactamase relative and penicillin-binding proteins, aminoglycoside modification enzymes, alternation of antibiotic target sites, lipopolysaccharide relative, and other mechanisms. A total of 35 antibiotics were tested for the antimicrobial susceptibility of A. baumannii CYZ, and the organism exhibited a stronger antimicrobial resistance ability. The phylogenetic relationship indicated that A. baumannii CYZ has high homology with A. baumannii ATCC 17978; however, the former also exhibited its specific genome characteristics. Our research results give insight into the genetic antimicrobial-resistant features of A. baumannii CYZ as well as provide a genetic basis for the further study of the phenotype.

基金:

基金编号: 81902026 H2022206303 C2021206004 BJ2020018 QN2023260 C20200344 20372601D

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出版当年[2023]版:
大类 | 4 区 医学
小类 | 4 区 免疫学 4 区 微生物学
最新[2025]版:
大类 | 4 区 医学
小类 | 4 区 免疫学 4 区 微生物学
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出版当年[2023]版:
Q4 IMMUNOLOGY Q4 MICROBIOLOGY
最新[2023]版:
Q4 IMMUNOLOGY Q4 MICROBIOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2023版] 出版当年五年平均 出版前一年[2022版]

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第一作者机构: [1]Hebei Med Univ, Dept Pathogen Biol, Shijiazhuang, Peoples R China
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通讯机构: [1]Hebei Med Univ, Dept Pathogen Biol, Shijiazhuang, Peoples R China [*1]Department of Pathogenic Biology, Hebei Medical University, Shijiazhuang 050017, PR China
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