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MYLK and CALD1 as molecular targets in bladder cancer

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机构: [1]Department of Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [2]Department of urology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [3]Research Center, Hebei Province Hospital of Chinese Medicine, Affiliated Hospital of Hebei University of Traditional Chinese Medicine, Shijiazhuang, Hebei, China. Department of Pathology and Laboratory Medicine, Department of Pathology, Kanazawa Medical University, Uchinada, Ishikawa, Japan. [4]Department of anesthesiology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [5]Department of radiotherapy, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [6]Department of ophthalmology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
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关键词: Bioinformatics bladder cancer CALD MYLK

摘要:
Bladder cancer (BC) is a malignant tumor that occurs in bladder mucosa. However, relationship between myosin light chain kinase (MYLK) and CALD1 and BC remains unclear. The BC datasets GSE65635 and GSE100926 were downloaded from gene expression omnibus by GPL14951 and GPL14550. Multiple datasets were merged and batched. Differentially expressed genes (DEGs) were screened and weighted gene co-expression network analysis was performed. gene ontology (GO) and Kyoto Encyclopedia of Gene and Genome analysis, gene set enrichment analysis, immune infiltration analysis, survival analysis and Comparative Toxicogenomics Database were performed. TargetScan screened miRNAs that regulated central DEGs. 1026 DEGs were identified. According to GO analysis, DEGs were mainly enriched in cancer pathway, cGMP-PKG signaling pathway, Apelin signaling pathway and proteoglycans in cancer. The enrichment items are similar to GO and Kyoto Encyclopedia of Gene and Genome enrichment projects for DEGs, which were mainly enriched in cancer pathways and leukocyte trans-endothelial cell migration. Among enrichment projects of metascape, GO has regulation of the enzyme-linked receptor protein signaling pathway and silk-based process, as well as an enrichment network stained by enrichment terms and P values. Nine core genes (ACTA2, MYLK, MYH11, MYL9, ACTG2, TPM1, TPM2, TAGLN and CALD1) were obtained, which were highly expressed in tumor tissue samples and lowly expressed in normal tissue samples. Nine genes were associated with necrosis, inflammation, tumor, edema, and ureteral obstruction. MYLK and CALD1 are highly expressed in the BC. The higher expression of MYLK and CALD1, the worse prognosis.Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc.

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大类 | 4 区 医学
小类 | 4 区 医学:内科
最新[2025]版:
大类 | 4 区 医学
小类 | 4 区 医学:内科
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Q2 MEDICINE, GENERAL & INTERNAL
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Q2 MEDICINE, GENERAL & INTERNAL

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第一作者机构: [1]Department of Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
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通讯机构: [2]Department of urology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [*1]Department of urology, The Fourth Hospital of Hebei Medical University, 12 Jiankang Road, 050000 Shijiazhuang, China
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