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Identification of Lower Grade Glioma Antigens Based on Ferroptosis Status for mRNA Vaccine Development

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机构: [1]Hebei Med Univ, Hosp 4, Dept Neurosurg, Shijiazhuang 050000, Peoples R China [2]Hebei Med Univ, Hosp 4, Dept Endocrinol, Shijiazhuang 050000, Peoples R China [3]Hebei Med Univ, Hosp 4, Dept Hepatobiliary Surg, Shijiazhuang 050000, Peoples R China [4]Hebei Med Univ, Hosp 2, Dept Neurosurg, Shijiazhuang 050000, Peoples R China
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关键词: ferroptosis lower grade glioma mRNA vaccine immunotherapy

摘要:
Purpose: mRNA vaccines represent a promising and innovative strategy within the realm of cancer immunotherapy. However, their efficacy in treating lower-grade glioma (LGG) requires evaluation. Ferroptosis exhibits close associations with the initiation, evolution, and suppression of cancer. In this study, we explored the landscape of the ferroptosis-associated tumor microenvironment to facilitate the development of mRNA vaccines for LGG patients. Patients and Methods: Genomic and clinical data of the LGG patients was obtained from the Cancer Genome Atlas (TCGA) and Chinese Glioma Genome Atlas (CGGA) databases. Ferroptosis-related tumor antigens were identified based on differential expression, mutation status, correlation with antigen-presenting cells, and prognosis, relevance to immunogenic cell death (ICD). Antigen expression levels in LGG specimens and cell lines were validated using real time-polymerase chain reaction (RT-PCR). Consensus clustering was employed for patient classification. The immune landscapes of ferroptosis subtypes were further characterized, including immune responses, prognostic ability, tumor microenvironment, and tumor-related signatures. Results: Five tumor antigens, namely, HOTAIR, IDO1, KIF20A, NR5A2, and RRM2 were identified in LGG. RT-PCR demonstrated higher expression of these genes in LGG compared to the control. Twelve gene modules and four ferroptosis subtypes (FS1-FS4) of LGG were defined. FS2 and FS4, characterized as "cold" tumors due to their decreased tumor mutation burden (TMB) and immune checkpoint proteins (ICPs), were deemed appropriate candidates for the mRNA vaccine. Conclusion: HOTAIR, IDO1, KIF20A, NR5A2, and RRM2 were identified as promising candidate antigens for the development of an LGG mRNA vaccine, particularly offering potential benefits to FS2 and FS4 patients.

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出版当年[2025]版:
大类 | 4 区 医学
小类 | 4 区 药学
最新[2025]版:
大类 | 4 区 医学
小类 | 4 区 药学
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最新[2023]版:
Q3 PHARMACOLOGY & PHARMACY

影响因子: 最新[2023版] 最新五年平均 出版当年[2024版] 出版当年五年平均 出版前一年[2023版]

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第一作者机构: [1]Hebei Med Univ, Hosp 4, Dept Neurosurg, Shijiazhuang 050000, Peoples R China
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通讯机构: [2]Hebei Med Univ, Hosp 4, Dept Endocrinol, Shijiazhuang 050000, Peoples R China
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