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Exploring the immune landscape and drug prediction of an M2 tumor-associated macrophage-related gene signature in EGFR-negative lung adenocarcinoma

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机构: [1]Department of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [2]Department of Infectious Diseases, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [3]Department of Endoscopy, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
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关键词: bulk RNA-seq EGFR-negative lung adenocarcinoma immune landscape single-cell RNA-seq tumorassociated macrophage

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Improving immunotherapy efficacy for EGFR-negative lung adenocarcinoma (LUAD) patients remains a critical challenge, and the therapeutic effect of immunotherapy is largely determined by the tumor microenvironment (TME). Tumor-associated macrophages (TAMs) are the top-ranked immune infiltrating cells in the TME, and M2-TAMs exert potent roles in tumor promotion and chemotherapy resistance. An M2-TAM-based prognostic signature was constructed by integrative analysis of single-cell RNA-seq (scRNA-seq) and bulk RNA-seq data to reveal the immune landscape and select drugs in EGFR-negative LUAD.M2-TAM-based biomarkers were obtained from the intersection of bulk RNA-seq data and scRNA-seq data. After consensus clustering of EGFR-negative LUAD into different clusters based on M2-TAM-based genes, we compared the prognosis, clinical features, estimate scores, immune infiltration, and checkpoint genes among the clusters. Next, we combined univariate Cox and LASSO regression analyses to establish an M2-TAM-based prognostic signature.CCL20, HLA-DMA, HLA-DRB5, KLF4, and TMSB4X were verified as prognostic M2-like TAM-related genes by univariate Cox and LASSO regression analyses. IPS and TMB analyses revealed that the high-risk group responded better to common immunotherapy.The study shows the potential of the M2-like TAM-related gene signature in EGFR-negative LUAD, explores the immune landscape based on M2-like TAM-related genes, and predict immunotherapy response of patients with EGFR-negative LUAD, providing a new insight for individualized treatment.© 2024 The Author(s). Thoracic Cancer published by John Wiley & Sons Australia, Ltd.

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大类 | 4 区 医学
小类 | 4 区 肿瘤学 4 区 呼吸系统
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大类 | 4 区 医学
小类 | 4 区 肿瘤学 4 区 呼吸系统
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Q2 RESPIRATORY SYSTEM Q3 ONCOLOGY

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第一作者机构: [1]Department of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [*1]Department of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang 050000, Hebei, China
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通讯机构: [1]Department of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China. [*1]Department of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang 050000, Hebei, China
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