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E2F1 Promotes the Occurrence of Head and Neck Squamous Cell Carcinoma and Serves as a Prognostic Biomarker

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机构: [1]Second Hosp Shijiazhuang, Dept Stomatol, Huaxi Rd 53, Shijiazhuang 050051, Hebei, Peoples R China [2]Hebei Med Univ, Hosp 4, Dept Stomatol, Jiankang Rd 12, Shijiazhuang 050000, Hebei, Peoples R China [3]Zhao Cty Peoples Hosp, Inspect Dept, Yongtong Rd 1, Shijiazhuang 051530, Hebei, Peoples R China
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关键词: Immune infiltration E2F transcription factor 1 Head and neck squamous cell carcinoma Prognosis Independent prognostic factor

摘要:
Head and neck squamous cell carcinoma (HNSCC) is a common malignant tumor occurring in various sites such as the oral cavity, pharynx, larynx, and nasal cavity. This study aimed to explore the biological functions and prognostic value of E2F transcription factor 1 (E2F1) in HNSCC. Transcriptome and single-cell sequencing (scRNA-seq) data of HNSCC patients were analyzed using data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). All samples were divided into high and low expression groups based on the expression levels of E2F1. A risk model was constructed based on Lasso-Cox regression, and the differences between the two groups in terms of prognosis were explored. The scRNA-seq data of HNSCC samples were analyzed using the Seurat package to identify cell types. AUCell was used to score different types of cells, and subsequently, the interaction pathways between the high-scoring cell population and other cell populations were explored using the CellChat package. The expression level of E2F1 in tumor tissues was higher than that in normal tissues, which was confirmed by in vitro experiments. Analysis of transcriptome data from TCGA revealed significant differences in overall survival (OS) between the high and low expression groups. Prognostic genes were selected based on DEGs between the two groups, and a risk model was constructed. Subsequently, a nomogram model was constructed based on clinical factors and risk scores, which exhibited good predictive performance. The expression landscape of prognostic genes in different cell types was explored using scRNA-seq data of HNSCC samples. Dendritic cell populations were identified as high-scoring cell populations, and the pathways of interaction between this cell population and other cell populations were explored. We identified E2F1 as an independent prognostic factor closely associated with the prognosis and immune response of HNSCC.

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出版当年[2025]版:
大类 | 3 区 生物学
小类 | 3 区 生物工程与应用微生物 4 区 生化与分子生物学
最新[2025]版:
大类 | 3 区 生物学
小类 | 3 区 生物工程与应用微生物 4 区 生化与分子生物学
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出版当年[2024]版:
Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
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Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY

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第一作者机构: [1]Second Hosp Shijiazhuang, Dept Stomatol, Huaxi Rd 53, Shijiazhuang 050051, Hebei, Peoples R China
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