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KNTC1 and MCM2 are the molecular targets of gallbladder cancer

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机构: [1]Capital Med Univ, Beijing Rehabil Hosp, Dept Gastrointestinal Surg, Beijing 100144, Peoples R China [2]Hebei Med Univ, Dept Hepatobiliary Surg, Affiliated Hosp 4, Shijiazhuang 050011, Hebei, Peoples R China
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关键词: KNTC1 MCM2 molecular targets gallbladder cancer bioinformatics

摘要:
Background: Gallbladder carcinoma is a malignant epithelial tumor of gallbladder with a high degree of malignancy. However, relationship between KNTC1 and MCM2 and gallbladder cancer is unclear. Methods: GSE139682 and GSE202479 were downloaded from gene expression omnibus (GEO). Differentially expressed genes (DEGs) were screened. Functional enrichment analysis and gene set enrichment analysis (GSEA) were performed. Protein-protein interaction (PPI) Network was constructed and analyzed. Gene expression heat map was drawn. Comparative toxicogenomics database (CTD) analysis was performed to find diseases most related to core genes. TargetScan was performed for screening miRNAs that regulated central Results: 230 DEGs were identified. According to GObp analysis, they were mainly concentrated in regulation of ossification, regulation of spindle microtubule and centromere attachment, cytoskeleton tissue of cortical actin. According to GOcc analysis, they are mainly concentrated in plasma membrane part, cell junction, plasma membrane region and anterior membrane. According to GOmf analysis, they are mainly enriched in protein homodimerization activity, proximal promoter sequence-specific DNA binding and sulfur compound binding. KEGG showed that target genes were mainly enriched in Hippo signal pathway, p53 signal pathway and cancer pathway. KIFC2, TUBG1, RACGAP1, CHMP4C, SFN and MYH11 were identified as core genes. Gene expression heat map showed that KNTC1, MCM2, CKAP2, RACGAP1, CCNB1 were highly expressed in gallbladder carcinoma samples. CTD analysis showed that KNTC1, MCM2, CKAP2, RACGAP1, CCNB1 were associated with head and neck squamous cell carcinoma, necrosis, inflammation and hepatomegaly. Conclusions: KNTC1 and MCM2 are highly expressed in gallbladder cancer. Higher expression level correlates with worse prognosis.

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出版当年[2023]版:
大类 | 3 区 医学
小类 | 3 区 细胞生物学 3 区 老年医学
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Q2 CELL BIOLOGY Q2 GERIATRICS & GERONTOLOGY
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第一作者机构: [1]Capital Med Univ, Beijing Rehabil Hosp, Dept Gastrointestinal Surg, Beijing 100144, Peoples R China
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通讯机构: [2]Hebei Med Univ, Dept Hepatobiliary Surg, Affiliated Hosp 4, Shijiazhuang 050011, Hebei, Peoples R China
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